Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a6B1AVK5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a6B1AVK5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a6B1AVK5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm8825-201ENSMUST00000182565 998 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm4518-201ENSMUST00000182638 718 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm45167-201ENSMUST00000208007 322 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a6B1AVK5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col4a6B1AVK5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms