Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col6a5A6H584 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.36□□□□□ -0.43
Col6a5A6H584 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col6a5A6H584 Gm37153-201ENSMUST00000193637 231 ntBASIC12.36□□□□□ -0.43
Col6a5A6H584 Gm43125-201ENSMUST00000201724 730 ntBASIC12.36□□□□□ -0.43
Col6a5A6H584 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.36□□□□□ -0.43
Col6a5A6H584 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col6a5A6H584 Gm9899-201ENSMUST00000065519 555 ntBASIC12.36□□□□□ -0.43
Col6a5A6H584 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC12.35□□□□□ -0.43
Col6a5A6H584 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Gm4899-201ENSMUST00000178708 719 ntBASIC12.35□□□□□ -0.43
Col6a5A6H584 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Gm7774-201ENSMUST00000200064 533 ntBASIC12.35□□□□□ -0.43
Col6a5A6H584 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Gm7730-201ENSMUST00000212486 454 ntBASIC12.35□□□□□ -0.43
Col6a5A6H584 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.35□□□□□ -0.43
Col6a5A6H584 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a5A6H584 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.35□□□□□ -0.43
Col6a5A6H584 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col6a5A6H584 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col6a5A6H584 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Gm25287-201ENSMUST00000103846 110 ntBASIC12.34□□□□□ -0.43
Col6a5A6H584 Gm22918-201ENSMUST00000103855 110 ntBASIC12.34□□□□□ -0.43
Col6a5A6H584 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col6a5A6H584 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC12.34□□□□□ -0.43
Col6a5A6H584 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Gm13365-201ENSMUST00000121188 973 ntBASIC12.34□□□□□ -0.43
Col6a5A6H584 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.34□□□□□ -0.43
Col6a5A6H584 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Col6a5A6H584 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.34□□□□□ -0.43
Col6a5A6H584 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col6a5A6H584 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.33□□□□□ -0.44
Col6a5A6H584 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.33□□□□□ -0.44
Col6a5A6H584 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.33□□□□□ -0.44
Col6a5A6H584 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Col6a5A6H584 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.33□□□□□ -0.44
Col6a5A6H584 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col6a5A6H584 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Col6a5A6H584 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms