Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a4A2AX52 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.81□□□□□ -0.2
Col6a4A2AX52 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.81□□□□□ -0.2
Col6a4A2AX52 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.81□□□□□ -0.2
Col6a4A2AX52 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Gm15590-201ENSMUST00000078419 552 ntBASIC13.81□□□□□ -0.2
Col6a4A2AX52 Gm10175-201ENSMUST00000086013 645 ntBASIC13.81□□□□□ -0.2
Col6a4A2AX52 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col6a4A2AX52 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Gm29707-201ENSMUST00000196325 491 ntBASIC13.8□□□□□ -0.2
Col6a4A2AX52 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.8□□□□□ -0.2
Col6a4A2AX52 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col6a4A2AX52 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.79□□□□□ -0.2
Col6a4A2AX52 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col6a4A2AX52 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Col6a4A2AX52 Gm15920-201ENSMUST00000118998 402 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms