Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Igkv1-88A0A140T8N1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm9694-201ENSMUST00000193347 1189 ntBASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm4974-201ENSMUST00000209974 875 ntBASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Igkv1-88A0A140T8N1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm37179-201ENSMUST00000194862 823 ntBASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Gm18025-201ENSMUST00000221733 862 ntBASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Igkv1-88A0A140T8N1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv1-88A0A140T8N1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms