Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Mir5122-201ENSMUST00000175004 89 ntBASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc194A0A140LIT1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc194A0A140LIT1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc194A0A140LIT1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc194A0A140LIT1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc194A0A140LIT1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc194A0A140LIT1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms