Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm9987-201ENSMUST00000069768 567 ntBASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhgb8A0A140LI48 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm13559-201ENSMUST00000120476 863 ntBASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm27463-201ENSMUST00000183569 57 ntBASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhgb8A0A140LI48 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhgb8A0A140LI48 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm38027-201ENSMUST00000192315 235 ntBASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm29791-202ENSMUST00000207888 369 ntBASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhgb8A0A140LI48 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.83□□□□□ -0.03
Pcdhgb8A0A140LI48 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhgb8A0A140LI48 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms