Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Igkv8-28A0A0G2JE47 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Igkv8-28A0A0G2JE47 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm44616-201ENSMUST00000206417 1732 ntBASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm38285-201ENSMUST00000192928 922 ntBASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Igkv8-28A0A0G2JE47 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Gm10655-201ENSMUST00000098658 1397 ntBASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Igkv8-28A0A0G2JE47 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms