Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav19A0A0B4J1K4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Gm27000-201ENSMUST00000182943 842 ntBASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav19A0A0B4J1K4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Gm9731-201ENSMUST00000209480 747 ntBASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Gm10602-201ENSMUST00000098239 609 ntBASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav19A0A0B4J1K4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 H2-K2-201ENSMUST00000174250 1049 ntBASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Gm37179-201ENSMUST00000194862 823 ntBASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav19A0A0B4J1K4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms