Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav4-3A0A0B4J1K1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm43017-201ENSMUST00000198296 752 ntBASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm6576-201ENSMUST00000169678 883 ntBASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav4-3A0A0B4J1K1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.21□□□□□ -0.62
Trav4-3A0A0B4J1K1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms