Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm4968-201ENSMUST00000071458 858 ntBASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv20A0A0B4J1H5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm13148-201ENSMUST00000118892 745 ntBASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv20A0A0B4J1H5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv20A0A0B4J1H5 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv20A0A0B4J1H5 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms