Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm17661-201ENSMUST00000170317 270 ntBASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trbv3A0A0A6YYE2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv3A0A0A6YYE2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm10033-202ENSMUST00000211874 928 ntBASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv3A0A0A6YYE2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv3A0A0A6YYE2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.68□□□□□ -0.38
Trbv3A0A0A6YYE2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms