Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm11950-201ENSMUST00000121615 838 ntBASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm6345-202ENSMUST00000180900 204 ntBASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Gm29518-201ENSMUST00000190858 372 ntBASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ighv1-52A0A0A6YXC3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms