Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav17A0A075B655 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav17A0A075B655 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav17A0A075B655 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.08□□□□□ -0.31
Trav17A0A075B655 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav17A0A075B655 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav17A0A075B655 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.08□□□□□ -0.32
Trav17A0A075B655 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav17A0A075B655 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Gm8495-201ENSMUST00000188740 694 ntBASIC13.07□□□□□ -0.32
Trav17A0A075B655 Gm9731-201ENSMUST00000209480 747 ntBASIC13.07□□□□□ -0.32
Trav17A0A075B655 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav17A0A075B655 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.06□□□□□ -0.32
Trav17A0A075B655 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm27275-201ENSMUST00000184318 272 ntBASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm18666-201ENSMUST00000190039 958 ntBASIC13.06□□□□□ -0.32
Trav17A0A075B655 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav17A0A075B655 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Trav17A0A075B655 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms