Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.12□□□□□ -0.47
Trav16d-dv11A0A075B617 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav16d-dv11A0A075B617 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav16d-dv11A0A075B617 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms