Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav4n-4A0A075B615 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Gm10129-202ENSMUST00000193100 1316 ntBASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4n-4A0A075B615 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav4n-4A0A075B615 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav4n-4A0A075B615 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Sybu-209ENSMUST00000228639 4113 ntBASIC11.41□□□□□ -0.58
Trav4n-4A0A075B615 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms