Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AL500522.2-201ENST00000448562 343 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 RPL21P11-201ENST00000461458 483 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 MTND1P16-201ENST00000465177 898 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC087312.1-201ENST00000471411 480 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 ACTG1P13-201ENST00000486987 1043 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
HOXD13P35453 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD13P35453 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXD13P35453 WBP1LP4-201ENST00000505043 344 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC010625.1-201ENST00000511296 403 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD13P35453 AP004371.1-201ENST00000525240 214 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.2□□□□□ -1.74
HOXD13P35453 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD13P35453 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD13P35453 AC135001.1-201ENST00000544546 283 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.2□□□□□ -1.74
HOXD13P35453 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD13P35453 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXD13P35453 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXD13P35453 MIR4637-201ENST00000582405 84 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD13P35453 AC103881.1-201ENST00000603476 538 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC080013.4-201ENST00000607624 649 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC009974.1-201ENST00000608881 455 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC004825.2-201ENST00000616634 455 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC092650.2-201ENST00000619984 902 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 AC023510.2-201ENST00000622162 746 ntBASIC4.2□□□□□ -1.74
HOXD13P35453 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXD13P35453 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
HOXD13P35453 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD13P35453 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD13P35453 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXD13P35453 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 RNU6-1181P-201ENST00000384191 106 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 MIR3074-201ENST00000384885 81 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 MTCO3P12-201ENST00000416718 547 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 TIMM9P2-201ENST00000419324 266 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 MRPS18BP2-201ENST00000434310 759 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 RPL7P28-201ENST00000437739 740 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AF228730.2-201ENST00000438784 848 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXD13P35453 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 TRBV12-2-201ENST00000489763 344 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 RN7SL323P-201ENST00000494712 295 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 RNU2-58P-201ENST00000516403 183 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 AL139174.1-201ENST00000531489 886 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXD13P35453 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.19□□□□□ -1.74
HOXD13P35453 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 DUXAP3-201ENST00000603616 594 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AL137849.1-201ENST00000604767 169 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AC069304.2-201ENST00000605154 435 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 AC243773.3-201ENST00000613270 256 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 MIR1322-201ENST00000638013 71 ntBASIC4.19□□□□□ -1.74
HOXD13P35453 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
HOXD13P35453 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXD13P35453 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXD13P35453 AL390862.1-201ENST00000635467 1469 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD13P35453 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD13P35453 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXD13P35453 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXD13P35453 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HOXD13P35453 SNORA31-201ENST00000362607 130 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 SNORA51.2-201ENST00000364595 132 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 SNORD116.1-201ENST00000365628 92 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HOXD13P35453 AL583834.1-201ENST00000406943 343 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AL450338.1-201ENST00000407987 512 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AL049610.1-201ENST00000423374 372 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 ATP5F1P1-201ENST00000433775 569 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXD13P35453 AC079395.1-201ENST00000510981 262 ntBASIC4.18□□□□□ -1.74
HOXD13P35453 AC116353.3-201ENST00000511215 249 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 152.7 ms