Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
USF1P22415 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 ZNF33BP1-201ENST00000452497 1834 ntBASIC3□□□□□ -1.93
USF1P22415 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
USF1P22415 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USF1P22415 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USF1P22415 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 MIR184-201ENST00000384962 84 ntBASIC2.99□□□□□ -1.93
USF1P22415 SSXP10-201ENST00000402595 565 ntBASIC2.99□□□□□ -1.93
USF1P22415 AL138880.1-201ENST00000405824 642 ntBASIC2.99□□□□□ -1.93
USF1P22415 RNU6-77P-201ENST00000410554 91 ntBASIC2.99□□□□□ -1.93
USF1P22415 RNA5SP120-201ENST00000410900 112 ntBASIC2.99□□□□□ -1.93
USF1P22415 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.99□□□□□ -1.93
USF1P22415 RPF2P1-201ENST00000424137 906 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.99□□□□□ -1.93
USF1P22415 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 MTCO1P43-201ENST00000431831 488 ntBASIC2.99□□□□□ -1.93
USF1P22415 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 AC010881.1-201ENST00000433830 235 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.99□□□□□ -1.93
USF1P22415 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.99□□□□□ -1.93
USF1P22415 RPS15AP1-201ENST00000457423 391 ntBASIC2.99□□□□□ -1.93
USF1P22415 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 RPL5P24-201ENST00000463742 885 ntBASIC2.99□□□□□ -1.93
USF1P22415 SYPL1P1-201ENST00000473622 768 ntBASIC2.99□□□□□ -1.93
USF1P22415 RPL23AP44-201ENST00000482216 473 ntBASIC2.99□□□□□ -1.93
USF1P22415 AP000563.1-201ENST00000490865 758 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.99□□□□□ -1.93
USF1P22415 AC104057.1-201ENST00000515547 497 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.99□□□□□ -1.93
USF1P22415 RNU6-1102P-201ENST00000516149 96 ntBASIC2.99□□□□□ -1.93
USF1P22415 RNU2-27P-201ENST00000516185 142 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC008489.1-201ENST00000524271 483 ntBASIC2.99□□□□□ -1.93
USF1P22415 AP000926.4-201ENST00000527351 454 ntBASIC2.99□□□□□ -1.93
USF1P22415 CR383656.14-201ENST00000551951 406 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.99□□□□□ -1.93
USF1P22415 MIR3690-201ENST00000580266 75 ntBASIC2.99□□□□□ -1.93
USF1P22415 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 AC011492.1-201ENST00000600023 315 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC005000.2-201ENST00000605468 310 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC245100.7-201ENST00000609678 442 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC018816.2-201ENST00000621460 353 ntBASIC2.99□□□□□ -1.93
USF1P22415 AP003355.3-201ENST00000623465 114 ntBASIC2.99□□□□□ -1.93
USF1P22415 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 HPVC1-201ENST00000629899 1198 ntBASIC2.99□□□□□ -1.93
USF1P22415 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.99□□□□□ -1.93
USF1P22415 AC005183.1-201ENST00000603687 1979 ntBASIC2.99□□□□□ -1.93
USF1P22415 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USF1P22415 ZNF826P-207ENST00000622273 1910 ntBASIC2.99□□□□□ -1.93
USF1P22415 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USF1P22415 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.98□□□□□ -1.93
USF1P22415 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USF1P22415 RNU6-600P-201ENST00000362524 99 ntBASIC2.98□□□□□ -1.93
USF1P22415 RNU6-792P-201ENST00000363490 107 ntBASIC2.98□□□□□ -1.93
USF1P22415 RNU6-444P-201ENST00000383988 108 ntBASIC2.98□□□□□ -1.93
USF1P22415 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USF1P22415 AL121972.1-201ENST00000402023 252 ntBASIC2.98□□□□□ -1.93
USF1P22415 AL391417.1-201ENST00000404100 426 ntBASIC2.98□□□□□ -1.93
USF1P22415 RN7SKP285-201ENST00000410137 318 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC008173.1-201ENST00000418901 264 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.98□□□□□ -1.93
USF1P22415 AL513174.1-201ENST00000423182 629 ntBASIC2.98□□□□□ -1.93
USF1P22415 HSFY1P1-201ENST00000423928 1178 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC002075.2-201ENST00000425207 252 ntBASIC2.98□□□□□ -1.93
USF1P22415 MRPS18BP2-201ENST00000434310 759 ntBASIC2.98□□□□□ -1.93
USF1P22415 SETP5-201ENST00000437270 562 ntBASIC2.98□□□□□ -1.93
USF1P22415 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.98□□□□□ -1.93
USF1P22415 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.98□□□□□ -1.93
USF1P22415 SLC31A1P1-201ENST00000451221 567 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.98□□□□□ -1.93
USF1P22415 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.98□□□□□ -1.93
USF1P22415 NF1P3-201ENST00000457709 450 ntBASIC2.98□□□□□ -1.93
USF1P22415 RPS4XP10-201ENST00000465034 731 ntBASIC2.98□□□□□ -1.93
USF1P22415 SETP6-201ENST00000479329 568 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.98□□□□□ -1.93
USF1P22415 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.98□□□□□ -1.93
USF1P22415 RPL21P47-201ENST00000483696 477 ntBASIC2.98□□□□□ -1.93
USF1P22415 SETP14-201ENST00000497538 873 ntBASIC2.98□□□□□ -1.93
USF1P22415 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USF1P22415 PHBP14-201ENST00000512887 367 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.98□□□□□ -1.93
USF1P22415 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.98□□□□□ -1.93
USF1P22415 AC004217.3-201ENST00000551552 878 ntBASIC2.98□□□□□ -1.93
USF1P22415 TRAV15-201ENST00000556680 249 ntBASIC2.98□□□□□ -1.93
USF1P22415 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.98□□□□□ -1.93
USF1P22415 AC107954.1-201ENST00000565906 727 ntBASIC2.98□□□□□ -1.93
USF1P22415 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms