Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-379P-201ENST00000363813 104 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 SOD2P1-201ENST00000396543 562 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AL359643.1-201ENST00000404109 423 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 RNU2-3P-201ENST00000410144 191 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC096921.1-201ENST00000411661 375 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 DPPA2P2-201ENST00000418220 897 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC093155.2-201ENST00000420734 937 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.8□□□□□ -1.48
NFKB1P19838 AL451139.1-201ENST00000434718 346 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.8□□□□□ -1.48
NFKB1P19838 AC073109.1-201ENST00000445066 978 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC079804.1-201ENST00000461922 436 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AP001992.1-205ENST00000462248 379 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 RPS17P15-201ENST00000475609 349 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC008638.1-201ENST00000506035 866 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC093853.1-201ENST00000515689 483 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC021678.3-201ENST00000517893 476 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AL137161.1-201ENST00000532231 390 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC137627.1-201ENST00000545761 289 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.8□□□□□ -1.48
NFKB1P19838 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.8□□□□□ -1.48
NFKB1P19838 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
NFKB1P19838 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.8□□□□□ -1.48
NFKB1P19838 AL138895.2-201ENST00000603019 178 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AL355816.1-201ENST00000607951 118 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AL627230.1-201ENST00000613077 211 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC004696.1-201ENST00000614345 607 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 PLCE1P1-201ENST00000622094 305 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.8□□□□□ -1.48
NFKB1P19838 AC011155.2-201ENST00000623202 216 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 AC129915.3-201ENST00000634128 948 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NFKB1P19838 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NFKB1P19838 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.8□□□□□ -1.48
NFKB1P19838 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
NFKB1P19838 AL138713.1-201ENST00000624026 2130 ntBASIC5.8□□□□□ -1.48
NFKB1P19838 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NFKB1P19838 THAP12P4-201ENST00000528321 2266 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NFKB1P19838 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NFKB1P19838 RNA5SP326-201ENST00000363209 110 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 Y_RNA.463-201ENST00000384271 102 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 RNU6-1026P-201ENST00000384465 108 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 Y_RNA.556-201ENST00000384677 113 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 EIF4E2P1-201ENST00000393781 255 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 RNU2-18P-201ENST00000411224 162 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC093151.1-201ENST00000427711 313 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AL359265.2-201ENST00000434367 631 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AP000936.3-201ENST00000438127 255 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 HMGB1P12-201ENST00000438594 598 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC104073.1-201ENST00000451988 151 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AC011225.1-201ENST00000457751 369 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 RPL21P6-201ENST00000479171 504 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AC110794.1-201ENST00000505816 425 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC097473.1-201ENST00000508142 408 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.79□□□□□ -1.48
NFKB1P19838 RNU2-10P-201ENST00000516375 211 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC136777.2-201ENST00000522979 358 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AP001284.1-201ENST00000528393 2118 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC027544.3-201ENST00000535082 757 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC024224.1-201ENST00000538284 609 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.79□□□□□ -1.48
NFKB1P19838 COX6CP3-201ENST00000580869 223 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC025857.2-201ENST00000602711 238 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AC092747.3-201ENST00000603769 301 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 AL049794.2-201ENST00000616301 365 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.79□□□□□ -1.48
NFKB1P19838 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.79□□□□□ -1.48
NFKB1P19838 AC079776.5-201ENST00000641920 211 ntBASIC5.79□□□□□ -1.48
NFKB1P19838 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NFKB1P19838 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms