Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL160281.1-201ENST00000605307 311 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 HMGN2P28-201ENST00000606102 262 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AL159169.3-201ENST00000608871 561 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 AC087821.2-201ENST00000637086 450 ntBASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PCDHGA1Q9Y5H4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC130650.2-201ENST00000618736 2403 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 MAPK10-253ENST00000641010 4072 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 USP8P1-201ENST00000494673 3183 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 U8.11-201ENST00000384699 133 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 U8.12-201ENST00000384701 133 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 MIR491-201ENST00000384877 84 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 MIR513A2-201ENST00000385249 127 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 Y_RNA.578-201ENST00000390903 88 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 PTMAP5-201ENST00000393073 333 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL079342.2-201ENST00000403367 482 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC006548.1-201ENST00000427470 102 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 NANOGP6-201ENST00000429190 847 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL358472.1-201ENST00000431295 329 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 GTF2IP3-201ENST00000433887 494 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 TBCAP1-201ENST00000436520 327 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC092393.1-201ENST00000439625 742 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 MTCO1P53-201ENST00000441633 699 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC104073.1-201ENST00000451988 151 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 U8.18-201ENST00000459285 133 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC079203.1-201ENST00000487972 404 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 USP9YP5-201ENST00000511770 630 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC093853.1-201ENST00000515689 483 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL669831.4-202ENST00000590817 238 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC103881.1-201ENST00000603476 538 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL592148.2-201ENST00000612210 372 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC016597.2-201ENST00000613256 341 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AL354976.1-201ENST00000613843 387 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 CYCSP41-201ENST00000616920 296 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 AC123767.1-202ENST00000620407 817 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 CR381572.1-201ENST00000625098 102 ntBASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDHGA1Q9Y5H4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC097504.1-201ENST00000515103 2415 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC067945.1-201ENST00000342609 618 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU1-15P-201ENST00000353977 144 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RNU6-224P-201ENST00000384055 107 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AL138880.1-201ENST00000405824 642 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 VN1R8P-201ENST00000407739 893 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 OSTCP5-201ENST00000425293 453 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC017083.1-201ENST00000428093 483 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC005345.1-201ENST00000431868 217 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RPS11P1-201ENST00000451072 473 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 VPS26AP1-201ENST00000483197 979 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 RN7SL271P-201ENST00000487601 295 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 OR5H5P-201ENST00000503164 928 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORA74D-201ENST00000516404 141 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORA70.24-201ENST00000517233 118 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 NDUFA5P2-201ENST00000519723 344 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC092747.2-201ENST00000545069 983 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 SNORD39.3-201ENST00000584451 71 ntBASIC3.85□□□□□ -1.79
PCDHGA1Q9Y5H4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms