Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HMGA1P17096 VN1R79P-201ENST00000593540 513 ntBASIC2.76□□□□□ -1.97
HMGA1P17096 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HMGA1P17096 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.76□□□□□ -1.97
HMGA1P17096 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HMGA1P17096 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.75□□□□□ -1.97
HMGA1P17096 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HMGA1P17096 NACA3P-201ENST00000359690 648 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.75□□□□□ -1.97
HMGA1P17096 AC009963.1-201ENST00000417265 157 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 AL513328.1-201ENST00000446460 224 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.75□□□□□ -1.97
HMGA1P17096 AC093331.1-201ENST00000521474 169 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 AP000857.1-201ENST00000532151 543 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 SERPINE4P-201ENST00000554978 281 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.75□□□□□ -1.97
HMGA1P17096 AC010653.1-201ENST00000571108 881 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 AC026790.2-201ENST00000606282 430 ntBASIC2.75□□□□□ -1.97
HMGA1P17096 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HMGA1P17096 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HMGA1P17096 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HMGA1P17096 ZNF542P-204ENST00000482727 1305 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGA1P17096 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HMGA1P17096 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HMGA1P17096 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGA1P17096 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGA1P17096 RNA5SP239-201ENST00000410218 129 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 RPLP0P7-201ENST00000416050 667 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 AL139413.1-201ENST00000421309 217 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 AC007563.3-201ENST00000433233 371 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HMGA1P17096 AC244505.4-201ENST00000434905 287 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 SSXP5-201ENST00000443473 287 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.74□□□□□ -1.97
HMGA1P17096 DYNLL1P6-201ENST00000503440 264 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 OR8L1P-201ENST00000534005 955 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGA1P17096 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.74□□□□□ -1.97
HMGA1P17096 AL133271.1-201ENST00000538229 291 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.74□□□□□ -1.97
HMGA1P17096 MIR4635-201ENST00000583759 79 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGA1P17096 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HMGA1P17096 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGA1P17096 AP000526.1-201ENST00000603308 1388 ntBASIC2.74□□□□□ -1.97
HMGA1P17096 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.73□□□□□ -1.97
HMGA1P17096 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGA1P17096 OR10AB1P-202ENST00000641219 1686 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 MIR181B1-201ENST00000385240 110 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 AL445529.1-201ENST00000398713 389 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 AL512633.1-201ENST00000399931 655 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 MTND4LP20-201ENST00000402379 270 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 AL355379.1-201ENST00000405542 640 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 VN1R51P-201ENST00000411675 945 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 AC009969.1-201ENST00000438726 172 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGA1P17096 AL590399.6-201ENST00000446396 307 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 RNU7-170P-201ENST00000459303 61 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 RN7SL283P-201ENST00000489055 303 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
HMGA1P17096 AC017037.2-201ENST00000513850 890 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 UBTFL10-201ENST00000528532 562 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 AC243972.3-201ENST00000539655 198 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 AC027176.1-201ENST00000560204 514 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 CR381653.2-201ENST00000624041 768 ntBASIC2.73□□□□□ -1.97
HMGA1P17096 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HMGA1P17096 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HMGA1P17096 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGA1P17096 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGA1P17096 SNORD62.1-201ENST00000362541 86 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 AC011816.1-201ENST00000441346 546 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 AC135999.1-201ENST00000478962 479 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.72□□□□□ -1.97
HMGA1P17096 SNORA70.14-201ENST00000516205 110 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGA1P17096 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGA1P17096 AL512310.1-201ENST00000548639 172 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 AC079089.3-201ENST00000603094 673 ntBASIC2.72□□□□□ -1.97
HMGA1P17096 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGA1P17096 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGA1P17096 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HMGA1P17096 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGA1P17096 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGA1P17096 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HMGA1P17096 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.71□□□□□ -1.97
HMGA1P17096 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGA1P17096 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA1P17096 MYL8P-204ENST00000431574 518 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA1P17096 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGA1P17096 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGA1P17096 AC128713.1-201ENST00000471495 306 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AC103975.1-201ENST00000482506 483 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA1P17096 AC008565.1-201ENST00000509046 885 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 RNA5SP320-201ENST00000516263 124 ntBASIC2.71□□□□□ -1.98
HMGA1P17096 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms