Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 TMSB4XP1-201ENST00000424567 135 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.52□□□□□ -1.85
MT-ND1P03886 B3GNT2P1-201ENST00000434960 952 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC004022.1-201ENST00000447766 1066 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 Z99714.1-201ENST00000450463 807 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 RPL5P24-201ENST00000463742 885 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC006463.2-201ENST00000473326 348 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC084024.2-201ENST00000503480 791 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC118282.2-201ENST00000508739 374 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC092593.2-201ENST00000513866 913 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 RNU6-311P-201ENST00000516224 102 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 RNU6-1231P-201ENST00000517185 103 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 NDUFB9P3-201ENST00000521269 501 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC022695.1-201ENST00000522089 237 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 EEF1A1P37-201ENST00000522748 715 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MT-ND1P03886 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 ZNF192P1-203ENST00000565888 810 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 MIR5708-201ENST00000579723 85 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.52□□□□□ -1.85
MT-ND1P03886 CCDC58P3-201ENST00000590792 430 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AP001542.2-201ENST00000593141 364 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 VN1R83P-201ENST00000595685 445 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 KLKP1-201ENST00000595979 403 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AL513477.2-201ENST00000607858 568 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC005962.2-201ENST00000611427 652 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 MLECP1-201ENST00000615893 709 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC140725.3-201ENST00000616193 880 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC112200.1-201ENST00000625015 234 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 LINC02211-204ENST00000642024 1070 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.52□□□□□ -1.85
MT-ND1P03886 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
MT-ND1P03886 AC099786.3-201ENST00000565735 1410 ntBASIC3.52□□□□□ -1.85
MT-ND1P03886 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MT-ND1P03886 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.51□□□□□ -1.85
MT-ND1P03886 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.51□□□□□ -1.85
MT-ND1P03886 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.51□□□□□ -1.85
MT-ND1P03886 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 RNA5SP443-201ENST00000363083 132 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 snoZ40.1-201ENST00000364540 72 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 MIR184-201ENST00000384962 84 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 SNORA40.2-201ENST00000390847 128 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 RNU6-837P-201ENST00000391056 108 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 MTCO3P31-201ENST00000405526 789 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
MT-ND1P03886 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AL356095.1-201ENST00000417217 199 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 Z97055.1-201ENST00000419730 712 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 CYCSP43-201ENST00000438233 310 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.51□□□□□ -1.85
MT-ND1P03886 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.51□□□□□ -1.85
MT-ND1P03886 AC239367.2-201ENST00000447309 705 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 COX6CP18-201ENST00000448769 222 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.51□□□□□ -1.85
MT-ND1P03886 ANP32BP2-201ENST00000454525 545 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 SNORD11.1-201ENST00000459482 85 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AC005410.1-202ENST00000460347 485 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AC010618.1-201ENST00000469924 477 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AC110792.1-201ENST00000491826 472 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 SNORA70.14-201ENST00000516205 110 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 NDUFA5P2-201ENST00000519723 344 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.51□□□□□ -1.85
MT-ND1P03886 AP001207.1-201ENST00000524051 481 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AP003385.6-201ENST00000531603 374 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MT-ND1P03886 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.51□□□□□ -1.85
MT-ND1P03886 AC025884.1-201ENST00000556034 378 ntBASIC3.51□□□□□ -1.85
MT-ND1P03886 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms