Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NECTIN3Q9NQS3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL161781.1-201ENST00000354277 403 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 RNU4-21P-201ENST00000362802 126 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 Y_RNA.436-201ENST00000384097 102 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 RN7SKP266-201ENST00000410232 287 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 RN7SKP106-201ENST00000410832 272 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 MTCO1P17-201ENST00000411522 491 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 RPS12P5-201ENST00000423449 371 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC069285.2-201ENST00000440210 275 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC011753.3-201ENST00000443436 406 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 H2AFZP5-201ENST00000446960 382 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 OR6K1P-201ENST00000456766 971 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AP001992.1-205ENST00000462248 379 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 UBTFL6-201ENST00000477929 1024 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC007686.1-201ENST00000488511 463 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC108022.1-201ENST00000493466 478 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC022447.3-201ENST00000506865 495 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AF131216.2-201ENST00000512316 564 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 RNU6-27P-201ENST00000516146 107 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 RPL12P22-201ENST00000519073 490 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 OR6C73P-201ENST00000546432 358 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC069240.1-201ENST00000548774 375 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC105129.1-201ENST00000560250 297 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL121834.1-201ENST00000572284 509 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC090615.1-201ENST00000577519 154 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL669831.4-202ENST00000590817 238 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC073544.2-201ENST00000601155 540 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC025048.6-202ENST00000627667 438 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 AC012618.3-205ENST00000637896 1496 ntBASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NECTIN3Q9NQS3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AL445487.1-201ENST00000415694 1580 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RNU5F-6P-201ENST00000362979 116 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 Y_RNA.201-201ENST00000364052 96 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RNU6-343P-201ENST00000364709 104 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RNU6-744P-201ENST00000365557 107 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RNU6-1316P-201ENST00000384242 108 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RNY3P10-201ENST00000384764 102 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 MIR1305-201ENST00000408300 86 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RPL37P18-201ENST00000411602 243 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AC140479.3-201ENST00000418944 1126 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RPL7P57-201ENST00000423238 740 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 CYCSP46-201ENST00000423569 204 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AC007742.1-201ENST00000425789 329 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AC010153.1-201ENST00000432862 727 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AL359265.2-201ENST00000434367 631 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 MTCYBP45-201ENST00000435243 565 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 RPL37P21-201ENST00000435890 276 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 ELOCP26-201ENST00000436067 329 ntBASIC4.41□□□□□ -1.7
NECTIN3Q9NQS3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms