Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNVU1-14-201ENST00000384770 164 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AL355379.1-201ENST00000405542 640 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RNU4-74P-201ENST00000411280 161 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DMBP28068 MTCO3P4-201ENST00000419236 787 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 OR1AA1P-201ENST00000419597 916 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RPS15AP40-201ENST00000419621 391 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC097713.2-201ENST00000430199 356 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RPL21P110-201ENST00000433345 446 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 CST9LP2-201ENST00000437612 320 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 ISCA1P2-201ENST00000438679 421 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AL662791.1-201ENST00000441992 928 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RPS3AP12-201ENST00000443616 753 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC115115.1-201ENST00000449927 248 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 BX276092.4-201ENST00000452056 248 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RBMY2UP-201ENST00000453474 324 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC104689.1-201ENST00000473356 768 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC108860.1-201ENST00000484521 383 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RN7SL283P-201ENST00000489055 303 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 SUMO1P1-201ENST00000497904 306 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC010735.1-201ENST00000567305 1026 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC005412.1-201ENST00000580812 1049 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC006557.5-201ENST00000603126 811 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 HMGN2P28-201ENST00000606102 262 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC004832.5-201ENST00000608677 401 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DMBP28068 CR383658.2-201ENST00000547576 1525 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 AC116096.1-201ENST00000566804 2314 ntBASIC2.5□□□□□ -2.01
HLA-DMBP28068 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
HLA-DMBP28068 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DMBP28068 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DMBP28068 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DMBP28068 MIR148B-201ENST00000362252 99 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 U3.11-201ENST00000364476 212 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 HSFY4P-201ENST00000415994 1181 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 RPL7P46-201ENST00000425129 740 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 RNF19BPX-201ENST00000426224 625 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC006994.1-201ENST00000438212 839 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 RPS15AP29-201ENST00000445539 400 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 HMGN2P16-201ENST00000456802 261 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 RPL7P38-201ENST00000488396 739 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL358832.1-201ENST00000497800 389 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC025459.1-201ENST00000504072 156 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 FCF1P8-201ENST00000510322 597 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 RNA5SP385-201ENST00000515947 110 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 RN7SKP244-201ENST00000516513 307 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC084033.1-201ENST00000550830 633 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC074029.2-201ENST00000551045 634 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 uc_338.1-201ENST00000612113 180 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC093010.3-201ENST00000570269 15214 ntBASIC2.49□□□□□ -2.01
HLA-DMBP28068 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DMBP28068 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms