Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPS15AP17-201ENST00000470598 390 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AP001922.4-201ENST00000526967 290 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 MIR4436B2-201ENST00000581415 91 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 MIR4436B1-201ENST00000583272 91 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 SEPT7P9-203ENST00000604116 343 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC112187.2-201ENST00000604345 283 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC006566.1-201ENST00000608943 513 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC078899.5-201ENST00000612475 178 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC123768.4-201ENST00000616244 701 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC091046.3-201ENST00000631455 1574 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 AC117529.2-201ENST00000512159 2068 ntBASIC4.57□□□□□ -1.68
ATG4AQ8WYN0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC131971.1-201ENST00000332881 1482 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 SNORA58B-201ENST00000364259 136 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 RNU6-441P-201ENST00000384545 106 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AL049697.2-201ENST00000403708 294 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AL358176.3-201ENST00000420757 454 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 FNDC3CP-201ENST00000420795 1155 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 RPL7P30-201ENST00000420888 709 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 OFD1P18Y-201ENST00000420889 959 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 RPS27AP7-201ENST00000422792 455 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC104651.1-201ENST00000427559 735 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 HLA-N-201ENST00000437516 135 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 SNRPEP7-201ENST00000438350 220 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC138853.1-201ENST00000503549 823 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC015795.1-201ENST00000513669 327 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 RN7SKP298-201ENST00000515950 94 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 RNA5SP497-201ENST00000516081 97 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 MTND4LP26-201ENST00000518144 282 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 OR6C73P-201ENST00000546432 358 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC136619.2-201ENST00000563361 631 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 MIR4528-201ENST00000577763 90 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC119501.1-201ENST00000603646 475 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 HSPE1P14-201ENST00000605812 302 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AL008729.2-201ENST00000606393 473 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC103710.4-201ENST00000609301 899 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC013476.2-201ENST00000614456 459 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC027807.2-201ENST00000616099 408 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 SNX18P1Y-201ENST00000616231 511 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 MIR6730-201ENST00000622213 67 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC099654.12-201ENST00000639868 649 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 OR51H2P-202ENST00000641424 3046 ntBASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4AQ8WYN0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 GDI2P1-201ENST00000429312 1336 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 AP000756.2-201ENST00000624168 2567 ntBASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.55□□□□□ -1.68
ATG4AQ8WYN0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms