Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC015908.1-201ENST00000478739 476 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC126121.1-201ENST00000482313 553 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 TMEM248P1-201ENST00000510579 951 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC010265.1-201ENST00000513509 211 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC026402.1-201ENST00000513642 170 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.2□□□□□ -1.9
RFX4Q33E94 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX4Q33E94 OR6C73P-201ENST00000546432 358 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC022916.3-201ENST00000592961 742 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC067959.1-201ENST00000604334 379 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC090425.2-201ENST00000608818 501 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 AC084824.5-201ENST00000612009 413 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.2□□□□□ -1.9
RFX4Q33E94 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC112200.1-201ENST00000625015 234 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.2□□□□□ -1.9
RFX4Q33E94 ELL2P4-201ENST00000446870 1376 ntBASIC3.2□□□□□ -1.9
RFX4Q33E94 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.2□□□□□ -1.9
RFX4Q33E94 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFX4Q33E94 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RFX4Q33E94 OR6K3-202ENST00000368146 996 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 RNU6-354P-201ENST00000383862 107 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 RNU6-610P-201ENST00000384264 107 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 MIR607-201ENST00000385241 96 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 SNORA11C-201ENST00000408532 129 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 RNU2-21P-201ENST00000410368 188 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.19□□□□□ -1.9
RFX4Q33E94 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 RPL7P2-201ENST00000427639 268 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 RPL37P1-201ENST00000432310 284 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX4Q33E94 UBE2V1P5-201ENST00000440070 405 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX4Q33E94 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.19□□□□□ -1.9
RFX4Q33E94 GTF2IP12-201ENST00000456547 356 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC008379.1-201ENST00000463655 464 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC091564.1-201ENST00000464563 479 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 RPL21P18-201ENST00000469899 480 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC015724.1-201ENST00000478577 156 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC093755.1-201ENST00000512950 1023 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 CR383656.14-201ENST00000551951 406 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.19□□□□□ -1.9
RFX4Q33E94 HSPE1P5-201ENST00000561489 272 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC093510.2-201ENST00000562820 896 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 MIR5685-201ENST00000579080 79 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC021851.1-201ENST00000608537 1082 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AP005229.2-201ENST00000609980 697 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC018926.3-201ENST00000618841 406 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 MIR6810-201ENST00000622701 70 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC068880.4-201ENST00000623082 495 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC092608.3-201ENST00000625017 386 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 AC092184.1-201ENST00000625042 715 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC017104.5-201ENST00000637647 639 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC010733.2-201ENST00000589496 5702 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.19□□□□□ -1.9
RFX4Q33E94 AC021755.1-201ENST00000559747 1447 ntBASIC3.19□□□□□ -1.9
RFX4Q33E94 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFX4Q33E94 MTND4P8-201ENST00000514997 1362 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFX4Q33E94 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RFX4Q33E94 RPL7P26-201ENST00000333817 754 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFX4Q33E94 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFX4Q33E94 SNORA63.3-201ENST00000362682 132 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.18□□□□□ -1.9
RFX4Q33E94 PRRC2CP1-201ENST00000404428 159 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.18□□□□□ -1.9
RFX4Q33E94 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
RFX4Q33E94 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
RFX4Q33E94 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms