Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.99□□□□□ -1.77
LHX1P48742 AC012442.3-202ENST00000636742 206 ntBASIC3.99□□□□□ -1.77
LHX1P48742 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
LHX1P48742 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX1P48742 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
LHX1P48742 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX1P48742 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AC090229.1-201ENST00000590983 1609 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AL355578.1-201ENST00000607405 1328 ntBASIC3.98□□□□□ -1.77
LHX1P48742 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LHX1P48742 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LHX1P48742 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LHX1P48742 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
LHX1P48742 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LHX1P48742 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LHX1P48742 RNU6-1300P-201ENST00000391046 108 ntBASIC3.98□□□□□ -1.77
LHX1P48742 ATP5F1P3-201ENST00000397213 657 ntBASIC3.98□□□□□ -1.77
LHX1P48742 BTBD10P2-201ENST00000404779 676 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC069218.2-201ENST00000411665 344 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AL136133.1-201ENST00000413694 376 ntBASIC3.98□□□□□ -1.77
LHX1P48742 BOLA3P4-201ENST00000418151 400 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC004552.1-201ENST00000419089 348 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC007435.1-201ENST00000421086 415 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.98□□□□□ -1.77
LHX1P48742 AC096632.1-201ENST00000427395 310 ntBASIC3.98□□□□□ -1.77
LHX1P48742 MTND2P5-201ENST00000432656 1006 ntBASIC3.98□□□□□ -1.77
LHX1P48742 BX276092.4-201ENST00000452056 248 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.98□□□□□ -1.77
LHX1P48742 AC005410.1-202ENST00000460347 485 ntBASIC3.98□□□□□ -1.77
LHX1P48742 RPS26P3-201ENST00000470205 348 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC090543.2-201ENST00000483963 348 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC004057.1-201ENST00000485827 348 ntBASIC3.98□□□□□ -1.77
LHX1P48742 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.98□□□□□ -1.77
LHX1P48742 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.98□□□□□ -1.77
LHX1P48742 BOLA3P3-201ENST00000505182 232 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC010460.2-201ENST00000509054 677 ntBASIC3.98□□□□□ -1.77
LHX1P48742 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.98□□□□□ -1.77
LHX1P48742 AC093755.1-201ENST00000512950 1023 ntBASIC3.98□□□□□ -1.77
LHX1P48742 RN7SKP234-201ENST00000517173 224 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.98□□□□□ -1.77
LHX1P48742 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.98□□□□□ -1.77
LHX1P48742 AC015688.2-201ENST00000584523 262 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC008638.3-201ENST00000603341 463 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC025946.2-201ENST00000603398 234 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AL139395.1-201ENST00000603662 160 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC115621.1-201ENST00000604653 858 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AL163642.2-201ENST00000604722 1019 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC069545.1-201ENST00000605671 358 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC009974.1-201ENST00000608881 455 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC079684.1-201ENST00000621405 437 ntBASIC3.98□□□□□ -1.77
LHX1P48742 AC098679.5-201ENST00000624394 571 ntBASIC3.98□□□□□ -1.77
LHX1P48742 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LHX1P48742 ZNF285B-201ENST00000561698 1767 ntBASIC3.98□□□□□ -1.77
LHX1P48742 ZNF33CP-201ENST00000432492 2030 ntBASIC3.98□□□□□ -1.77
LHX1P48742 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LHX1P48742 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LHX1P48742 ELL2P4-201ENST00000446870 1376 ntBASIC3.98□□□□□ -1.77
LHX1P48742 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.98□□□□□ -1.77
LHX1P48742 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.98□□□□□ -1.77
LHX1P48742 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.97□□□□□ -1.77
LHX1P48742 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 AL359837.1-201ENST00000381357 287 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC007066.1-201ENST00000392902 381 ntBASIC3.97□□□□□ -1.77
LHX1P48742 ANAPC10P1-201ENST00000395991 556 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.97□□□□□ -1.77
LHX1P48742 RPS3AP9-201ENST00000417027 792 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AL035423.1-201ENST00000420331 213 ntBASIC3.97□□□□□ -1.77
LHX1P48742 GTF2IP23-201ENST00000423746 351 ntBASIC3.97□□□□□ -1.77
LHX1P48742 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.97□□□□□ -1.77
LHX1P48742 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.97□□□□□ -1.77
LHX1P48742 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LHX1P48742 USP9YP22-201ENST00000438971 294 ntBASIC3.97□□□□□ -1.77
LHX1P48742 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.97□□□□□ -1.77
LHX1P48742 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.97□□□□□ -1.77
LHX1P48742 AC022034.3-201ENST00000471393 478 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC108729.1-201ENST00000487812 947 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC069499.1-201ENST00000489433 509 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC005726.1-201ENST00000494679 427 ntBASIC3.97□□□□□ -1.77
LHX1P48742 PRELID3BP7-201ENST00000503606 469 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.97□□□□□ -1.77
LHX1P48742 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.97□□□□□ -1.77
LHX1P48742 AC139783.2-201ENST00000504847 1145 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.97□□□□□ -1.77
LHX1P48742 AC016065.2-201ENST00000514530 444 ntBASIC3.97□□□□□ -1.77
LHX1P48742 RNA5SP208-201ENST00000516156 78 ntBASIC3.97□□□□□ -1.77
LHX1P48742 IGLVIV-53-201ENST00000520107 367 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC007991.1-201ENST00000522680 631 ntBASIC3.97□□□□□ -1.77
LHX1P48742 ARL2BPP5-201ENST00000523141 481 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AP001372.4-201ENST00000524889 472 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.97□□□□□ -1.77
LHX1P48742 AL121766.1-201ENST00000547436 487 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.97□□□□□ -1.77
LHX1P48742 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.97□□□□□ -1.77
LHX1P48742 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.97□□□□□ -1.77
LHX1P48742 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.97□□□□□ -1.77
LHX1P48742 AC010680.4-201ENST00000605334 543 ntBASIC3.97□□□□□ -1.77
LHX1P48742 AC007390.2-201ENST00000606229 3803 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms