Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TGIF1P1-201ENST00000558095 802 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN4AP35499 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN4AP35499 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SCN4AP35499 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN4AP35499 NF1P10-201ENST00000613227 742 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SCN4AP35499 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN4AP35499 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN4AP35499 SYT14P1-202ENST00000600441 1448 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN4AP35499 RNU6-805P-201ENST00000365643 106 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 MIR196B-201ENST00000384852 84 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN4AP35499 RN7SKP192-201ENST00000411291 327 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.54□□□□□ -1.84
SCN4AP35499 AC005189.1-201ENST00000431286 310 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 AL357520.1-201ENST00000441557 453 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 CYCSP20-201ENST00000473154 315 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 OR5G4P-201ENST00000525251 760 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.54□□□□□ -1.84
SCN4AP35499 VN1R79P-201ENST00000593540 513 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN4AP35499 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SCN4AP35499 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SCN4AP35499 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
SCN4AP35499 AC008725.1-201ENST00000605123 2263 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN4AP35499 AC105402.1-201ENST00000413336 545 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SCN4AP35499 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.54□□□□□ -1.84
SCN4AP35499 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.54□□□□□ -1.84
SCN4AP35499 NIPA2P5-201ENST00000452282 464 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 AC104687.1-201ENST00000485829 412 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 AP001960.1-201ENST00000506494 658 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 RNA5SP380-201ENST00000517190 98 ntBASIC3.54□□□□□ -1.84
SCN4AP35499 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN4AP35499 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCN4AP35499 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SCN4AP35499 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN4AP35499 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN4AP35499 SRIP2-201ENST00000428470 166 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN4AP35499 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 MTCO3P42-201ENST00000509488 518 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 MTCO3P39-201ENST00000514812 518 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 RNU1-143P-201ENST00000516296 146 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 SNORA31.21-201ENST00000517180 77 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN4AP35499 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN4AP35499 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.53□□□□□ -1.84
SCN4AP35499 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.53□□□□□ -1.84
SCN4AP35499 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN4AP35499 U1.23-201ENST00000610293 146 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 RNU1-68P-201ENST00000615382 146 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SCN4AP35499 U1.39-201ENST00000621562 146 ntBASIC3.53□□□□□ -1.84
SCN4AP35499 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.53□□□□□ -1.84
SCN4AP35499 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.52□□□□□ -1.85
SCN4AP35499 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.52□□□□□ -1.85
SCN4AP35499 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN4AP35499 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN4AP35499 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SCN4AP35499 AL353692.2-201ENST00000407054 335 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 RPL7P8-201ENST00000411964 730 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 MTND4LP21-201ENST00000415303 295 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN4AP35499 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN4AP35499 ANXA2P1-201ENST00000505539 926 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 CCNHP1-201ENST00000513311 678 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 RNU4-18P-201ENST00000516751 149 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.52□□□□□ -1.85
SCN4AP35499 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SCN4AP35499 AL121839.1-201ENST00000556233 1185 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 MIR6715B-201ENST00000637172 77 ntBASIC3.52□□□□□ -1.85
SCN4AP35499 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SCN4AP35499 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.52□□□□□ -1.85
SCN4AP35499 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SCN4AP35499 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SCN4AP35499 RPL7P26-201ENST00000333817 754 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SCN4AP35499 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN4AP35499 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SCN4AP35499 MIR887-201ENST00000401258 79 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.51□□□□□ -1.85
SCN4AP35499 AL445528.1-201ENST00000426330 420 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 FAR1P1-201ENST00000427163 934 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 UBE2V2P3-201ENST00000433562 437 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 AC239798.3-201ENST00000454459 408 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 USP9YP5-201ENST00000511770 630 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 Y_RNA.673-201ENST00000516306 88 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN4AP35499 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.51□□□□□ -1.85
SCN4AP35499 AC107016.2-201ENST00000547968 190 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.51□□□□□ -1.85
SCN4AP35499 AC107905.1-201ENST00000616204 426 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 ZNF658B-202ENST00000615961 3375 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 RNU6-304P-201ENST00000364855 107 ntBASIC3.51□□□□□ -1.85
SCN4AP35499 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms