Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC067852.4-201ENST00000590314 478 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC012493.2-201ENST00000595083 291 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC007687.1-201ENST00000602704 304 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 MIR92B-201ENST00000607575 96 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC104307.1-201ENST00000616142 196 ntBASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.46□□□□□ -1.86
CTDNEP1O95476 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTDNEP1O95476 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 AC007537.2-201ENST00000472093 511 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 TMED11P-201ENST00000479478 690 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 AP004217.1-201ENST00000480579 346 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 RPL23AP44-201ENST00000482216 473 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 RPL32P34-201ENST00000486380 400 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 FABP5P6-201ENST00000510588 409 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 PSMA2P1-201ENST00000526365 646 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 SNRPGP1-201ENST00000553864 222 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 AL731537.2-201ENST00000561565 951 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 AC116563.2-201ENST00000624751 535 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.45□□□□□ -1.86
CTDNEP1O95476 MIR3651-201ENST00000630427 90 ntBASIC3.45□□□□□ -1.86
CTDNEP1O95476 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CTDNEP1O95476 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CTDNEP1O95476 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 MTND5P1-201ENST00000445440 1375 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 MIR208A-201ENST00000362287 71 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 MIR181B1-201ENST00000385240 110 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 RNA5SP498-201ENST00000411342 120 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTDNEP1O95476 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC007563.3-201ENST00000433233 371 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC093156.1-201ENST00000440382 670 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 MTCO3P43-201ENST00000440974 771 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC104629.2-201ENST00000468627 598 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC034236.1-201ENST00000469891 373 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 RPL7P23-201ENST00000493874 747 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 IGKV2-23-201ENST00000518729 323 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 OR5G4P-201ENST00000525251 760 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC008083.2-201ENST00000546707 476 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC007179.3-201ENST00000604976 235 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AL021368.1-201ENST00000607490 540 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AL355816.1-201ENST00000607951 118 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.44□□□□□ -1.86
CTDNEP1O95476 AC138649.5-201ENST00000637456 137 ntBASIC3.44□□□□□ -1.86
CTDNEP1O95476 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 SNORA27.3-201ENST00000364937 134 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CTDNEP1O95476 RNU6-40P-201ENST00000384254 107 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 USP9YP19-201ENST00000412165 485 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 CR848007.2-201ENST00000424918 787 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL512649.1-201ENST00000428997 581 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL138799.3-201ENST00000438968 350 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC127537.2-201ENST00000439258 465 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC017099.1-201ENST00000448261 1028 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL162389.1-201ENST00000449233 177 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 AP000893.1-201ENST00000474462 794 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC092451.1-201ENST00000480211 153 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 PRELID3BP6-201ENST00000503839 571 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 AC034244.2-201ENST00000514668 858 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 MTCO1P30-201ENST00000515244 580 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.43□□□□□ -1.86
CTDNEP1O95476 RNA5SP380-201ENST00000517190 98 ntBASIC3.43□□□□□ -1.86
CTDNEP1O95476 OR4A2P-201ENST00000527276 913 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms