Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 RNU6-335P-201ENST00000364563 113 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 RNA5SP189-201ENST00000364920 115 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 SUGT1P1-201ENST00000379514 476 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 AL391417.1-201ENST00000404100 426 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 MTND2P16-201ENST00000419987 799 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 GTF2IP3-201ENST00000433887 494 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC28A1O00337 AL034418.1-201ENST00000448675 860 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 FCF1P6-201ENST00000456841 595 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 snoU13.3-201ENST00000459441 104 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC28A1O00337 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC28A1O00337 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 SNORA19.3-201ENST00000516165 130 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 RNU2-58P-201ENST00000516403 183 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 AC022695.1-201ENST00000522089 237 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AP001189.2-201ENST00000527320 189 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC28A1O00337 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 AL121576.1-201ENST00000556055 276 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC28A1O00337 MIR4700-201ENST00000578311 74 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC107982.3-201ENST00000584957 985 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AL355812.1-201ENST00000603215 216 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 DPRXP5-201ENST00000604662 539 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AL591034.3-201ENST00000605511 685 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC28A1O00337 AC024060.1-201ENST00000607052 494 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC009318.4-201ENST00000620496 486 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 AC079684.1-201ENST00000621405 437 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC28A1O00337 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC28A1O00337 AC099654.8-201ENST00000637757 681 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.62□□□□□ -1.83
SLC28A1O00337 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC28A1O00337 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AL121657.1-201ENST00000327215 531 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 SNORA62-201ENST00000365493 153 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 RNU6-761P-201ENST00000384148 107 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 SNORA3.3-201ENST00000408712 125 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 RNU4-78P-201ENST00000410940 126 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 RAC1P8-201ENST00000427086 527 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 MOB1AP1-201ENST00000430903 535 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 RPL21P112-201ENST00000434403 463 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC28A1O00337 MTATP6P14-201ENST00000455189 673 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AC099563.1-201ENST00000456086 418 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
SLC28A1O00337 NDUFA5P9-201ENST00000472609 340 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC28A1O00337 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC28A1O00337 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC008489.1-201ENST00000524271 483 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC28A1O00337 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC28A1O00337 AC020910.2-201ENST00000603635 610 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC28A1O00337 AL136370.1-201ENST00000608166 691 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AC006338.2-201ENST00000616864 791 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AC073968.1-201ENST00000618594 637 ntBASIC3.61□□□□□ -1.83
SLC28A1O00337 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms