Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MTATP6P27-201ENST00000416987 621 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 ELOCP14-201ENST00000428070 331 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 COX6CP13-201ENST00000428703 226 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 ELOCP7-201ENST00000439968 331 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AP000542.1-201ENST00000448473 371 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 RN7SL443P-201ENST00000464331 290 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 PABPC1P3-201ENST00000469174 459 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AP000852.1-201ENST00000472460 573 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 RBM43P1-201ENST00000476891 1081 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 RPS3AP14-201ENST00000483907 780 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC034222.1-201ENST00000494052 532 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AK6P1-201ENST00000540219 478 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AL845331.3-202ENST00000562856 261 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC011840.5-201ENST00000582125 771 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC005730.3-201ENST00000583067 366 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 HMGN1P30-201ENST00000589286 268 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC011468.4-201ENST00000603942 409 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC109780.1-201ENST00000451768 1344 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 CBX3P1-201ENST00000325243 554 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 Y_RNA.89-201ENST00000363031 102 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 RNU6-1085P-201ENST00000363576 107 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 RNU6-534P-201ENST00000364877 106 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 SNORA2.3-201ENST00000383920 135 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 RNU6-761P-201ENST00000384148 107 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MIR105-2-201ENST00000385083 81 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 ARF4P3-201ENST00000397387 509 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AL031679.1-201ENST00000400616 525 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 RPS20P2-201ENST00000402520 389 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 RPL7P25-201ENST00000404151 721 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 SPTLC1P2-201ENST00000407089 121 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MTND3P17-201ENST00000416968 344 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC104333.2-201ENST00000422630 192 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 USP9YP36-201ENST00000424581 829 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AL031736.2-201ENST00000426573 787 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC002486.1-201ENST00000435098 391 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC098614.3-201ENST00000438957 440 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 C1DP4-201ENST00000455429 424 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 OR52A4P-201ENST00000472867 958 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MTND1P3-201ENST00000484956 952 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC007182.2-201ENST00000489251 402 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 RN7SL441P-201ENST00000492388 296 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC069439.1-201ENST00000494739 167 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 STMN1P2-201ENST00000508435 439 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC105914.1-201ENST00000511798 226 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 Y_RNA.693-201ENST00000516641 110 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC068993.1-201ENST00000546724 589 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC068446.3-201ENST00000555285 382 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 MIR3691-201ENST00000578066 90 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC090616.5-202ENST00000582111 297 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 BBIP1P1-201ENST00000602999 279 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 COX6CP4-201ENST00000605798 228 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC011816.2-201ENST00000607089 556 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC123768.4-201ENST00000616244 701 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC012150.2-201ENST00000621300 544 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 AC018445.2-201ENST00000622987 260 ntBASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PPARGC1AQ9UBK2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms