Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 HMGN2P7-201ENST00000456186 273 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 APOOP4-201ENST00000513530 597 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 SNORD116-26-201ENST00000516006 96 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC104027.1-201ENST00000521887 300 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4□□□□□ -1.77
RPAP1Q9BWH6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC004024.1-201ENST00000549244 247 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 EIF4BP1-201ENST00000554881 351 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC022146.1-201ENST00000595307 847 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 AC011492.1-201ENST00000600023 315 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 AL365400.2-201ENST00000605604 902 ntBASIC4□□□□□ -1.77
RPAP1Q9BWH6 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4□□□□□ -1.77
RPAP1Q9BWH6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 OR5T3-201ENST00000303059 1023 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AL356968.1-201ENST00000416622 474 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 RPL23AP22-201ENST00000437556 453 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC006028.1-201ENST00000438379 402 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 MED6P1-201ENST00000439659 713 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 XKRY2-201ENST00000442362 1093 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 HMGB3P21-201ENST00000452483 547 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 RN7SL330P-201ENST00000469709 307 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AP000893.1-201ENST00000474462 794 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC025459.1-201ENST00000504072 156 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC021678.1-201ENST00000505195 936 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 RNU1-143P-201ENST00000516296 146 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 MIR4512-201ENST00000583257 77 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC005242.1-201ENST00000585658 438 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AL355802.4-201ENST00000607635 548 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC110792.4-201ENST00000609843 298 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 U1.23-201ENST00000610293 146 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 RNU1-68P-201ENST00000615382 146 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 U1.39-201ENST00000621562 146 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 AC009452.1-201ENST00000640823 606 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 MTCO1P14-201ENST00000441695 1559 ntBASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RPAP1Q9BWH6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 RAD1P1-201ENST00000231383 813 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 EI24P2-201ENST00000397776 1076 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 RNU4-74P-201ENST00000411280 161 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AC063979.1-201ENST00000415539 377 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AL138785.1-201ENST00000425821 331 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 ETF1P3-201ENST00000430422 1160 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AL353705.1-201ENST00000433468 480 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AL831737.1-201ENST00000441288 271 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 TXNP1-201ENST00000441872 371 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 MTND2P8-201ENST00000450555 1025 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 HMGN1P18-201ENST00000457642 277 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 S100A11P2-201ENST00000467589 312 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AC011037.1-201ENST00000483964 558 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 OR9N1P-202ENST00000494289 481 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 RNA5SP309-201ENST00000516670 106 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 ZNF92P3-201ENST00000596594 954 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AL162233.1-201ENST00000620014 944 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AC000123.2-201ENST00000623124 461 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AC026422.1-201ENST00000623961 452 ntBASIC3.98□□□□□ -1.77
RPAP1Q9BWH6 AF117829.1-206ENST00000621883 3802 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AL118496.1-201ENST00000440201 1812 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 AL353743.4-201ENST00000422653 1547 ntBASIC3.97□□□□□ -1.77
RPAP1Q9BWH6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms