Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
SCN11AQ9UI33 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 LINC01355-201ENST00000566551 5444 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 MIR423-201ENST00000362201 94 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 RN7SKP58-201ENST00000411010 305 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 NPM1P11-201ENST00000417106 855 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 MTND6P18-201ENST00000439477 513 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 AL513124.1-201ENST00000450410 614 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 AC004801.2-202ENST00000463559 283 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 TRBV12-1-201ENST00000479785 344 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 Y_RNA.673-201ENST00000516306 88 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 AF186190.1-201ENST00000517470 480 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 AL049874.4-201ENST00000557593 255 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 MIR4524B-201ENST00000581569 115 ntBASIC3.71□□□□□ -1.82
SCN11AQ9UI33 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.71□□□□□ -1.82
SCN11AQ9UI33 DDX18P3-201ENST00000404856 2007 ntBASIC3.7□□□□□ -1.82
SCN11AQ9UI33 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCN11AQ9UI33 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.7□□□□□ -1.82
SCN11AQ9UI33 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN11AQ9UI33 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.7□□□□□ -1.82
SCN11AQ9UI33 AC092851.1-201ENST00000535964 478 ntBASIC3.7□□□□□ -1.82
SCN11AQ9UI33 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.7□□□□□ -1.82
SCN11AQ9UI33 AC112503.1-201ENST00000608436 391 ntBASIC3.7□□□□□ -1.82
SCN11AQ9UI33 AL096803.3-201ENST00000609032 532 ntBASIC3.7□□□□□ -1.82
SCN11AQ9UI33 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCN11AQ9UI33 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 AL139039.1-201ENST00000401900 692 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 AL356057.1-202ENST00000402263 756 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 IPMKP1-201ENST00000425988 855 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 RAB28P3-201ENST00000448325 597 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 AC096947.1-201ENST00000603233 470 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 AP001005.3-201ENST00000622049 129 ntBASIC3.69□□□□□ -1.82
SCN11AQ9UI33 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SCN11AQ9UI33 U3.6-201ENST00000363622 211 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AL445529.1-201ENST00000398713 389 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AL512430.2-201ENST00000406786 339 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AC073136.2-201ENST00000417282 849 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 PPIAP17-201ENST00000438507 471 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 RPS3P1-201ENST00000456781 192 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AC128713.1-201ENST00000471495 306 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AL139286.1-201ENST00000604465 483 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 MIR1183-201ENST00000408856 89 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 TXNP1-201ENST00000441872 371 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 SCGB1D5P-201ENST00000515134 247 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AC234778.2-201ENST00000566241 354 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.68□□□□□ -1.82
SCN11AQ9UI33 MTND4P10-201ENST00000446199 1363 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.68□□□□□ -1.82
SCN11AQ9UI33 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 RSL24D1P4-201ENST00000400938 484 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 RN7SKP285-201ENST00000410137 318 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 ZYG11AP1-201ENST00000430329 837 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AC010095.1-201ENST00000443543 144 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 RPL31P13-201ENST00000484151 370 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AC111000.2-201ENST00000507775 550 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 RN7SKP43-201ENST00000516173 320 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AC107016.2-201ENST00000547968 190 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 MIR4435-1-201ENST00000582552 80 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AC006111.3-201ENST00000622137 383 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN11AQ9UI33 AL365361.1-201ENST00000566942 3481 ntBASIC3.67□□□□□ -1.82
SCN11AQ9UI33 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.66□□□□□ -1.82
SCN11AQ9UI33 OR2AS1P-201ENST00000427827 319 ntBASIC3.66□□□□□ -1.82
SCN11AQ9UI33 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms