Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC090589.1-201ENST00000473109 362 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 MTAPP1-201ENST00000489154 819 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AC005726.1-201ENST00000494679 427 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.97□□□□□ -1.61
COL3A1P02461 IGKV2D-19-201ENST00000523346 262 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.97□□□□□ -1.61
COL3A1P02461 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.97□□□□□ -1.61
COL3A1P02461 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.97□□□□□ -1.61
COL3A1P02461 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.97□□□□□ -1.61
COL3A1P02461 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.97□□□□□ -1.61
COL3A1P02461 AC104229.1-201ENST00000561364 255 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.97□□□□□ -1.61
COL3A1P02461 AC008739.3-201ENST00000603262 127 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AL138478.1-201ENST00000612252 832 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AC019072.1-201ENST00000604535 1551 ntBASIC4.97□□□□□ -1.61
COL3A1P02461 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL3A1P02461 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL3A1P02461 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.97□□□□□ -1.61
COL3A1P02461 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL3A1P02461 Y_RNA.517-201ENST00000384551 106 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 MIR449B-201ENST00000384995 97 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 PTMAP2-201ENST00000397627 327 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AL590704.1-201ENST00000402856 794 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 RPL7P27-201ENST00000403775 720 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 RNA5SP104-201ENST00000410989 118 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AL663109.1-201ENST00000411498 844 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC105402.1-201ENST00000413336 545 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 JKAMPP1-201ENST00000413804 919 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 CRYBB2P1-203ENST00000415709 538 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 ELOCP9-201ENST00000418624 239 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 GNG5P5-201ENST00000420444 220 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC069157.1-201ENST00000421749 137 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AL391219.1-201ENST00000422570 483 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.96□□□□□ -1.62
COL3A1P02461 CYCSP4-201ENST00000429682 331 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 MTCO1P45-201ENST00000431457 267 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.96□□□□□ -1.62
COL3A1P02461 OR2B8P-201ENST00000432841 938 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 GOT2P5-201ENST00000433995 546 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 NDUFB1P1-201ENST00000435191 180 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AL357520.1-201ENST00000441557 453 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL3A1P02461 HMGB3P6-201ENST00000444896 598 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL3A1P02461 RPL31P20-201ENST00000449593 360 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 RPS4XP6-201ENST00000477670 797 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 TRBV12-2-201ENST00000489763 344 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 AC026414.1-201ENST00000504046 698 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC010424.1-201ENST00000506336 297 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 SNORA70.18-201ENST00000516696 98 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL3A1P02461 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.96□□□□□ -1.62
COL3A1P02461 AC087481.2-201ENST00000565492 330 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 AC090616.2-202ENST00000584248 222 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.96□□□□□ -1.62
COL3A1P02461 LARP7P1-201ENST00000605576 316 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC069200.1-201ENST00000609511 323 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC024257.5-201ENST00000612739 531 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC022140.2-201ENST00000623500 188 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 AC009093.8-201ENST00000641769 292 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL3A1P02461 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.96□□□□□ -1.62
COL3A1P02461 AC093535.2-201ENST00000624769 2326 ntBASIC4.96□□□□□ -1.62
COL3A1P02461 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.96□□□□□ -1.62
COL3A1P02461 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
COL3A1P02461 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL3A1P02461 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL3A1P02461 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL3A1P02461 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 AC007823.1-201ENST00000569932 1566 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 FAM133CP-201ENST00000332869 704 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 RNU6-525P-201ENST00000363685 104 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 RNU6-83P-201ENST00000384568 112 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 TAF9BP2-201ENST00000400856 499 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 RPS3AP24-201ENST00000407896 734 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 AC008173.1-201ENST00000418901 264 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.95□□□□□ -1.62
COL3A1P02461 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL3A1P02461 AC008155.2-201ENST00000464337 397 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.95□□□□□ -1.62
COL3A1P02461 AC108941.1-201ENST00000502853 530 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.95□□□□□ -1.62
COL3A1P02461 AC104619.4-201ENST00000510773 249 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.95□□□□□ -1.62
COL3A1P02461 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.95□□□□□ -1.62
COL3A1P02461 RANP9-201ENST00000519957 271 ntBASIC4.95□□□□□ -1.62
COL3A1P02461 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms