Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 Y_RNA.154-201ENST00000363624 102 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 RNY3P1-201ENST00000365085 102 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 RNY3-201ENST00000365484 102 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.490-201ENST00000384413 102 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 SNORA68.2-201ENST00000391263 128 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR1302-11-201ENST00000408051 138 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR1302-9-201ENST00000408365 138 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR1302-10-201ENST00000408734 138 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL17P12-201ENST00000413391 526 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL360081.1-201ENST00000428299 555 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL358934.1-201ENST00000432346 324 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL049745.1-201ENST00000433953 286 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL7AP61-201ENST00000443410 636 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 RPS5P7-201ENST00000456664 608 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC021660.1-201ENST00000465006 554 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC063943.1-201ENST00000465434 453 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 HMGN1P13-201ENST00000505795 138 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC008758.3-201ENST00000507003 1829 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC105914.1-201ENST00000511798 226 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AF131216.2-201ENST00000512316 564 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-430P-201ENST00000517078 107 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 SMG1P4-204ENST00000523028 4131 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL133457.1-201ENST00000564251 987 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC091042.1-201ENST00000579213 173 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 SNORA74C-1-201ENST00000580726 201 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC011453.2-201ENST00000603737 729 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 MIR1302-2-201ENST00000607096 138 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC009233.1-201ENST00000616477 371 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC090574.1-201ENST00000623186 233 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL731532.2-201ENST00000623542 1953 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC011447.7-201ENST00000624228 1590 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC068880.5-201ENST00000624331 290 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AL645937.1-201ENST00000641739 1652 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 AC063976.2-201ENST00000425667 3556 ntBASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDK5RAP1Q96SZ6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU4-44P-201ENST00000363050 141 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU5D-1-201ENST00000363299 116 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 Y_RNA.296-201ENST00000364930 108 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-244P-201ENST00000391028 104 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RNA5SP345-201ENST00000410646 108 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC007390.1-201ENST00000415722 356 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 TBCAP2-201ENST00000416175 326 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 USP9YP13-201ENST00000417797 480 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL34P6-201ENST00000432390 345 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL35AP21-201ENST00000437667 333 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC022431.1-201ENST00000450941 438 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL23AP56-201ENST00000460778 453 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC092757.1-201ENST00000467293 467 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RPS29P25-201ENST00000481709 171 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC114967.1-201ENST00000504890 259 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC026427.2-201ENST00000506228 536 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL7L1P13-201ENST00000511702 739 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RNU6-327P-201ENST00000516270 127 ntBASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.09□□□□□ -1.59
CDK5RAP1Q96SZ6 RPL23AP53-201ENST00000521854 457 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms