Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL133457.1-201ENST00000564251 987 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 BRDTP1-201ENST00000605735 677 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN6P56747 AC112503.1-201ENST00000608436 391 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 MIR7851-201ENST00000610611 160 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AC091905.1-201ENST00000624400 311 ntBASIC3.37□□□□□ -1.87
CLDN6P56747 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN6P56747 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN6P56747 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN6P56747 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CLDN6P56747 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN6P56747 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN6P56747 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 MIR423-201ENST00000362201 94 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 RNU6-1293P-201ENST00000384077 107 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 TAF9BP1-201ENST00000396646 746 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AL138878.1-201ENST00000405131 347 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 RPL5P18-201ENST00000406671 891 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 MIR1289-1-201ENST00000408836 144 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN6P56747 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 OR5AW1P-201ENST00000426334 1006 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 HIGD1AP12-201ENST00000427832 281 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN6P56747 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 AC025750.2-201ENST00000442609 450 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC097499.1-201ENST00000444277 208 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN6P56747 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN6P56747 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 RNA5SP341-201ENST00000516261 117 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 RN7SKP277-201ENST00000516895 283 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 AC092747.2-201ENST00000545069 983 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN6P56747 AL121766.1-201ENST00000547436 487 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN6P56747 LARP7P3-201ENST00000579888 337 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 MIR4325-201ENST00000583049 90 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC245128.3-201ENST00000594721 748 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AL162713.1-201ENST00000604480 262 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN6P56747 RNU6-156P-201ENST00000621869 107 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC026422.1-201ENST00000623961 452 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC244205.2-202ENST00000635781 342 ntBASIC3.36□□□□□ -1.87
CLDN6P56747 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN6P56747 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLDN6P56747 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN6P56747 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN6P56747 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN6P56747 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN6P56747 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN6P56747 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN6P56747 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CLDN6P56747 EXOC5P1-201ENST00000510543 1969 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 METTL21EP-201ENST00000298105 713 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 ANKRD36P1-201ENST00000344424 659 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLDN6P56747 Y_RNA.510-201ENST00000384511 114 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CLDN6P56747 HSPE1P8-201ENST00000406997 288 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 COTL1P1-201ENST00000422309 375 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.35□□□□□ -1.87
CLDN6P56747 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN6P56747 EXTL2P1-201ENST00000446218 416 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 RPL29P29-201ENST00000448725 423 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN6P56747 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN6P56747 AP001992.1-205ENST00000462248 379 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AC092451.1-201ENST00000480211 153 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 OR9N1P-202ENST00000494289 481 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AC023141.12-201ENST00000512399 199 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 MTCO1P30-201ENST00000515244 580 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 RN7SKP283-201ENST00000517197 270 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN6P56747 AC008802.1-201ENST00000519121 791 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 SUMO2P20-201ENST00000520803 283 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN6P56747 AC004923.2-201ENST00000529649 369 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 OR8L1P-201ENST00000534005 955 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN6P56747 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.35□□□□□ -1.87
CLDN6P56747 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.35□□□□□ -1.87
CLDN6P56747 MIR4513-201ENST00000581077 86 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.35□□□□□ -1.87
CLDN6P56747 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CLDN6P56747 OR6C71P-202ENST00000641886 1107 ntBASIC3.35□□□□□ -1.87
CLDN6P56747 AC009501.3-201ENST00000605001 1352 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms