Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC021382.1-201ENST00000483523 359 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 RPL23AP72-201ENST00000492447 435 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 RPS4XP18-201ENST00000495480 763 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 PTGES3P3-201ENST00000511479 482 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 Vault.3-201ENST00000516676 95 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 RN7SKP147-201ENST00000517154 244 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC024940.3-201ENST00000538551 316 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC122688.1-201ENST00000541494 223 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC068446.3-201ENST00000555285 382 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC009101.1-201ENST00000568135 242 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.16□□□□□ -1.42
ERCC3P19447 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 AC004853.1-201ENST00000604902 698 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC011816.2-201ENST00000607089 556 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC006329.2-201ENST00000611491 394 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC040168.1-201ENST00000623594 991 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC112204.3-201ENST00000623822 332 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.16□□□□□ -1.42
ERCC3P19447 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC3P19447 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
ERCC3P19447 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ERCC3P19447 AL022311.1-201ENST00000623726 19416 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 MAPK10-304ENST00000641341 3984 ntBASIC6.16□□□□□ -1.42
ERCC3P19447 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
ERCC3P19447 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ERCC3P19447 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 AC017104.4-201ENST00000636283 1592 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC6.15□□□□□ -1.42
ERCC3P19447 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC3P19447 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ERCC3P19447 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ERCC3P19447 Y_RNA.453-201ENST00000384223 109 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC3P19447 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC3P19447 AC013429.2-201ENST00000418798 781 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 RPS15AP12-201ENST00000419498 388 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 ELOCP14-201ENST00000428070 331 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC3P19447 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 AC099670.2-201ENST00000435130 321 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 ELOCP7-201ENST00000439968 331 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 Z95327.1-201ENST00000446082 482 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ERCC3P19447 AZGP1P2-201ENST00000454506 345 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 Z92846.1-201ENST00000456203 268 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC053481.1-201ENST00000467217 306 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC3P19447 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC3P19447 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC3P19447 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.15□□□□□ -1.42
ERCC3P19447 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.15□□□□□ -1.42
ERCC3P19447 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.15□□□□□ -1.42
ERCC3P19447 LSM3P2-201ENST00000551246 273 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AL356432.3-201ENST00000568952 465 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC011447.4-201ENST00000587562 111 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.15□□□□□ -1.42
ERCC3P19447 AP000769.2-201ENST00000602344 396 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC092954.2-201ENST00000609103 430 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 BX664608.1-201ENST00000610519 487 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 MLECP1-201ENST00000615893 709 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC099494.2-201ENST00000623371 978 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 AC091925.2-201ENST00000625059 256 ntBASIC6.15□□□□□ -1.42
ERCC3P19447 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC3P19447 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ERCC3P19447 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
ERCC3P19447 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.15□□□□□ -1.43
ERCC3P19447 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC3P19447 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC3P19447 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ERCC3P19447 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
ERCC3P19447 AP001029.2-203ENST00000589795 4910 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 Y_RNA.1-201ENST00000352915 104 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 RNU6-1283P-201ENST00000365314 105 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 Y_RNA.409-201ENST00000383990 98 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 RPL23AP32-201ENST00000395315 459 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC3P19447 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.14□□□□□ -1.43
ERCC3P19447 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.14□□□□□ -1.43
ERCC3P19447 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 RPS12P5-201ENST00000423449 371 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 RIMKLBP2-201ENST00000424737 654 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.14□□□□□ -1.43
ERCC3P19447 AC006466.1-201ENST00000438721 289 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AL512326.1-201ENST00000443050 721 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 AC104634.1-201ENST00000452720 462 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 IFNWP4-201ENST00000453148 294 ntBASIC6.14□□□□□ -1.43
ERCC3P19447 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms