Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hdac6Q9Z2V5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac6Q9Z2V5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac6Q9Z2V5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac6Q9Z2V5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac6Q9Z2V5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac6Q9Z2V5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hdac6Q9Z2V5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hdac6Q9Z2V5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hdac6Q9Z2V5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hdac6Q9Z2V5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hdac6Q9Z2V5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Mir6404-201ENSMUST00000183699 94 ntBASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.53■□□□□ 0.88
Hdac6Q9Z2V5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Mir3113-201ENSMUST00000175478 76 ntBASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Gm27646-201ENSMUST00000183989 110 ntBASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Hdac6Q9Z2V5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hdac6Q9Z2V5 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Hdac6Q9Z2V5 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Hdac6Q9Z2V5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac6Q9Z2V5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac6Q9Z2V5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac6Q9Z2V5 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac6Q9Z2V5 Gm18622-201ENSMUST00000219361 595 ntBASIC20.51■□□□□ 0.87
Hdac6Q9Z2V5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms