Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh20Q9Z0M3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Gm6433-201ENSMUST00000118634 875 ntBASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdh20Q9Z0M3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Gm11336-201ENSMUST00000118168 334 ntBASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Gm26039-201ENSMUST00000158152 144 ntBASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cdh20Q9Z0M3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh20Q9Z0M3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.21■□□□□ 0.02
Cdh20Q9Z0M3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh20Q9Z0M3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh20Q9Z0M3 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cdh20Q9Z0M3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh20Q9Z0M3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms