Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Gm5864-201ENSMUST00000202263 970 ntBASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Rps4l-201ENSMUST00000071745 943 ntBASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Smarcb1Q9Z0H3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcb1Q9Z0H3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Smarcb1Q9Z0H3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Smarcb1Q9Z0H3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Mzt1-203ENSMUST00000227948 952 ntBASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smarcb1Q9Z0H3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Gm7507-201ENSMUST00000183053 1008 ntBASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smarcb1Q9Z0H3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Gm13884-201ENSMUST00000118103 829 ntBASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Gm18195-201ENSMUST00000207604 706 ntBASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Smarcb1Q9Z0H3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smarcb1Q9Z0H3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms