Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.67■□□□□ 0.26
Cldn3Q9Z0G9 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldn3Q9Z0G9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldn3Q9Z0G9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Cldn3Q9Z0G9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Cldn3Q9Z0G9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldn3Q9Z0G9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cldn3Q9Z0G9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cldn3Q9Z0G9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms