Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp17Q9R0S3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp17Q9R0S3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp17Q9R0S3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp17Q9R0S3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp17Q9R0S3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp17Q9R0S3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp17Q9R0S3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Gm4459-201ENSMUST00000118750 468 ntBASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Psmb5-202ENSMUST00000227257 622 ntBASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp17Q9R0S3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Mmp17Q9R0S3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp17Q9R0S3 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp17Q9R0S3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Mmp17Q9R0S3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Mmp17Q9R0S3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp17Q9R0S3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm15173-201ENSMUST00000122049 433 ntBASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm25925-201ENSMUST00000158314 306 ntBASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm6089-201ENSMUST00000197666 938 ntBASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp17Q9R0S3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 AV026068-213ENSMUST00000223675 1171 ntBASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp17Q9R0S3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.18■□□□□ 0.02
Mmp17Q9R0S3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms