Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col4a4Q9QZR9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col4a4Q9QZR9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Rprl2-201ENSMUST00000157150 290 ntBASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col4a4Q9QZR9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm4518-201ENSMUST00000182638 718 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col4a4Q9QZR9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms