Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Gm4459-201ENSMUST00000118750 468 ntBASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Gm8396-201ENSMUST00000057361 823 ntBASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Crlf1Q9JM58 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf1Q9JM58 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf1Q9JM58 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Gm17271-201ENSMUST00000165535 355 ntBASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Gm43438-201ENSMUST00000198133 379 ntBASIC13.15□□□□□ -0.3
Crlf1Q9JM58 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms