Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rbfox1Q9JJ43 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Actl10-202ENSMUST00000226583 1501 ntBASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rbfox1Q9JJ43 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rbfox1Q9JJ43 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Gm27463-201ENSMUST00000183569 57 ntBASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rbfox1Q9JJ43 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Gm13186-201ENSMUST00000118031 316 ntBASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Gm18115-201ENSMUST00000221209 621 ntBASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rbfox1Q9JJ43 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rbfox1Q9JJ43 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms