Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nup50Q9JIH2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Gm13474-201ENSMUST00000122466 815 ntBASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Gm2274-201ENSMUST00000184539 609 ntBASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup50Q9JIH2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup50Q9JIH2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.36■□□□□ 0.37
Nup50Q9JIH2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup50Q9JIH2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Gm13559-201ENSMUST00000120476 863 ntBASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Gm7213-201ENSMUST00000215977 950 ntBASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup50Q9JIH2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms