Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rhox4bQ9JI43 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.33□□□□□ -0.28
Rhox4bQ9JI43 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.32□□□□□ -0.28
Rhox4bQ9JI43 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Gm13401-201ENSMUST00000117074 291 ntBASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Zfp783-201ENSMUST00000095946 670 ntBASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rhox4bQ9JI43 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rhox4bQ9JI43 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms