Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rrp8Q9DB85 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rrp8Q9DB85 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.08■□□□□ 0.17
Rrp8Q9DB85 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Rrp8Q9DB85 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Rrp8Q9DB85 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rrp8Q9DB85 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Gm11594-201ENSMUST00000122313 162 ntBASIC16.07■□□□□ 0.16
Rrp8Q9DB85 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rrp8Q9DB85 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Mir5126-201ENSMUST00000175513 77 ntBASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rrp8Q9DB85 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rrp8Q9DB85 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms