Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp4bQ9D8B3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Gm22697-201ENSMUST00000175194 63 ntBASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp4bQ9D8B3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Gm21559-201ENSMUST00000220638 855 ntBASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Gm8587-201ENSMUST00000076538 843 ntBASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp4bQ9D8B3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp4bQ9D8B3 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp4bQ9D8B3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp4bQ9D8B3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms