Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc7Q9D541 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc7Q9D541 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc7Q9D541 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.27■□□□□ 0.67
Ccdc7Q9D541 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc7Q9D541 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc7Q9D541 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Gm13559-201ENSMUST00000120476 863 ntBASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc7Q9D541 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Gm11336-201ENSMUST00000118168 334 ntBASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc7Q9D541 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.23■□□□□ 0.67
Ccdc7Q9D541 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc7Q9D541 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Mir1668-201ENSMUST00000184114 107 ntBASIC19.22■□□□□ 0.67
Ccdc7Q9D541 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc7Q9D541 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc7Q9D541 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms