Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Gm18421-201ENSMUST00000204122 625 ntBASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vps28Q9D1C8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vps28Q9D1C8 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Gm29707-201ENSMUST00000196325 491 ntBASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Gm45328-201ENSMUST00000210942 917 ntBASIC16.85■□□□□ 0.29
Vps28Q9D1C8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vps28Q9D1C8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vps28Q9D1C8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps28Q9D1C8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps28Q9D1C8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps28Q9D1C8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps28Q9D1C8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps28Q9D1C8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps28Q9D1C8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps28Q9D1C8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms